Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846889.1_cds_XP_016509818.1_22722
CDS Infomation

[gene=LOC107827233] [db_xref=GeneID:107827233] [protein=serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X3] [protein_id=XP_016509818.1] [location=join(103276..103314,103989..104048,104164..104280,104851..104945,105050..105255,105529..105626,105987..106090,106229..106394,106510..106632,107155..107237,107965..108106,108297..108326,108453..108523,109011..109842)] [gbkey=CDS]
Sequence

ATGGTGCGGAAGACTGTTCCACTTATGAATTATGTTCAGACCCATCATGATGTTTTTCAA
CAGATGGTGGATTTGATTGGTATAACATCCATAATGGAGGTTTTGGTGCGACTTGTAGGA
GCTGATGATCATATGTACCCCAATACTATGGATGTAATGCAATGGTTGGCTGACAGCAGC
TTATTAGAAATGATAGTGGACAAATTGAACCCCTCTAGTTCTCCCGAAGTACATGCTAAT
GCAGCAGAAGCACTATGTGCAATAACCAGAAACACACCATCCCCCCTGGCCACCAAACTA
TCCAGCCCAAGTTTTGTAGCTAGGATATTTGATCATGCCCTCGAAGACTCACATTCAAAG
TCTTCCCTTGTCCATTCGTTGTCTGTCTGCATATCTCTGCTTGATCCTAAACGATCAATT
CCATCAACTATGATGTATTCTTTCCGGAACCAGCAGGTTTATGAGTCTCCCATGCATGCC
AATCCTGACACTATTGATGCAATGCTTCCTAAACTTAGTGGTTTACTTGAGCTATTGAGT
GTGTCATCTGATGAGAAGATTCTGCCAACAACATATGGAGAACTCAGGCCGCCTCTAGGA
AAACATCGCTTAAAGATTGTTGAATTCATTTCCGTGCTACTGAAAACTGGCAATGAAGTT
GCGGAGAAAGAATTGATTAGCTCCAGAACAATTGAGAGGGTCCTGAATCTCTTTTTTGAG
TACCCTTATAACAATGCGTTGCATCATCATGTTGAGAGTATAATTTACTCATGCTTGGAA
AGCAAGAACATCACAATTGTCGATCATCTTTTTGAAGAGTGCAATTTGATTGGGAAAATT
ATTCAAACAGATAAACAGCCTACAGTTTCTGGTGAAGAAAATCAGCCCACCTTACCAGCT
ACTGGAAGACGAGCACCCCGATTAGGTAACATAGGGCATATAACTAGGATTTCTAACAAA
CTCGTTCAGTTGGGAAACAATGATAACTGCATTCGAGCACATCTCGAGAAGAATATGGAA
TGGAGTGATTGGCATACTACTGTTTTACAGGAGCGTAATACAACAGAAAATGTCTATCGC
TGGGTTTGTGGCCGACCAACTGCATTGCACGACAGAACAAGGGAGAGTGATGAGGAAGAT
GTTCATGACAGAGACTATGATGTAGCCGCTTTAGCAAATAATCTGAGTCAAGCATTCCGC
TACACCATATATGATAATGATGATGCTGAAGAGGGGCGTGGAGCTCTTGATCGAGATGAT
GAGGATGTTTATTTTGATGATGAGTCTGCTGAAGTTGTGATATCATCCCTTAGGTTGGCA
GATGACCAGGGGAGCAGTTTGTTCACAAATTCAAACTGGTTTGCGTTCCAAGATGATAGA
ATTGGTGATGCTTCAATGAGTACCTCACCTACTGATGTGATGGAGGATATTAACCTCAAT
GGAACGTCAAATAGTAGTAACAGCAATAGTGATGATGAAGTGGTAGTTGGAGAAGAGGAT
GAATTGGCTGAGAGCAAAAATTCTAATGCAACACCCAGTTCTAGTTCAAACACGTTTAAT
GGGCTAAGTGGAGCCAATTCCGGTAATAATGGAGACTTCAATCAACAGAATGAGAAAGCA
GTCGCCTCAGCTGACATTACTCCGTTCCATTTTGAGACGTCAGGCCGTGACGACCCCTTT
GGTGACAGGTCTCTACCCGAATGGGTAGCATGGGGGGATGCCCCAAATATTCAAGTTGGT
GGATCCAGTGGGAACCCATTTGAAGATCATAATAATTCTGCTGACCATATTGCTAACTCA
GGGGAGATAGCAACTCCACCAATTAGTTCCACTTCTAGTTGCAGTGGAAAATCTATTCCA
AATGGTGTTTTATTCCCTGGTTCGAGCAAAAGTTCATCTGGATCTGATTCTAGTCAGAAA
GCAGCCACTGTTCCTTCGTTGTTTGAAGAGGATGTTGAATTTGTTGGCGTGGAAATTGAG
GGTACTGAGAAGGCGATGGAACATGCTCTTAAAGAGGGGATTGTTGGCGAAGCCGCTCCA
CTGAAAAGGAGCATTGTTCCTAAATCACCGGAAAAGGAAACCACAGATGATGGTGGGGCA
GGAACAAAAGAGTTCAACGATGCAAACTACTGGAGAGTCGATCAAGAAGTTGCCGTACTG
GAATGA

Peptide Sequence

PEP ID

XP_016509818.1
PEP Infomation

PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X3 [Nicotiana tabacum]
Sequence

MVRKTVPLMNYVQTHHDVFQQMVDLIGITSIMEVLVRLVGADDHMYPNTMDVMQWLADSS
LLEMIVDKLNPSSSPEVHANAAEALCAITRNTPSPLATKLSSPSFVARIFDHALEDSHSK
SSLVHSLSVCISLLDPKRSIPSTMMYSFRNQQVYESPMHANPDTIDAMLPKLSGLLELLS
VSSDEKILPTTYGELRPPLGKHRLKIVEFISVLLKTGNEVAEKELISSRTIERVLNLFFE
YPYNNALHHHVESIIYSCLESKNITIVDHLFEECNLIGKIIQTDKQPTVSGEENQPTLPA
TGRRAPRLGNIGHITRISNKLVQLGNNDNCIRAHLEKNMEWSDWHTTVLQERNTTENVYR
WVCGRPTALHDRTRESDEEDVHDRDYDVAALANNLSQAFRYTIYDNDDAEEGRGALDRDD
EDVYFDDESAEVVISSLRLADDQGSSLFTNSNWFAFQDDRIGDASMSTSPTDVMEDINLN
GTSNSSNSNSDDEVVVGEEDELAESKNSNATPSSSSNTFNGLSGANSGNNGDFNQQNEKA
VASADITPFHFETSGRDDPFGDRSLPEWVAWGDAPNIQVGGSSGNPFEDHNNSADHIANS
GEIATPPISSTSSCSGKSIPNGVLFPGSSKSSSGSDSSQKAATVPSLFEEDVEFVGVEIE
GTEKAMEHALKEGIVGEAAPLKRSIVPKSPEKETTDDGGAGTKEFNDANYWRVDQEVAVL
E

Transcript Sequence

Gene sequence data has not been registered.